PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487368.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 236aa    MW: 26535 Da    PI: 6.3013
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.6e-1184130554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  rE+ RRd++N++f eL ++l ++   + +K +K++ L  A + I +L
  XP_004487368.1  84 KACREKLRRDKLNDRFLELSSVLEPD---KLPKTDKVTLLNDAARVITQL 130
                     678***********************...******************999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-1271146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.8979130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-883130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.93E-783135No hitNo description
SMARTSM003534.6E-785136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-1286152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MDMDSSAGSS CWLYDYGFDI SVAASDFMAS DSTTAAFTWI PHTNITNPPS SNISLEMEYS  60
LDSTVLENAP SKRLKTESYA SGSKACREKL RRDKLNDRFL ELSSVLEPDK LPKTDKVTLL  120
NDAARVITQL RNEAERLKER NDELREKVKE LKAEKNELRD EKNKLKLDKE KLEQQVRSTT  180
VQQSSFLPNA LAAAKGQTGS HKLMPFIGYP GISMWQFMSP ATVDTSQDHL LRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1420861e-170BT142086.1 Medicago truncatula clone JCVI-FLMt-5A23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487368.11e-176PREDICTED: transcription factor bHLH115-like
SwissprotQ9C6822e-71BH115_ARATH; Transcription factor bHLH115
TrEMBLG7IKM31e-130G7IKM3_MEDTR; BHLH domain class transcription factor
STRINGGLYMA13G38140.11e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149161214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51070.13e-53bHLH family protein